STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_131000Hydrolase, NUDIX family. (192 aa)    
Predicted Functional Partners:
ACA1_271340
Phosphoribosylpyrophosphate synthetase.
  
 
 0.911
ACA1_280600
Phosphoribosylpyrophosphate synthetase.
  
 
 0.911
ACA1_042250
Phosphoglucomutase, putative; Belongs to the phosphohexose mutase family.
   
 
 0.909
ACA1_177470
ADP-sugar pyrophosphatase, putative; Belongs to the Nudix hydrolase family.
  
  
 
0.906
ACA1_038550
Phosphoglucomutase, putative.
  
  0.903
ACA1_254420
Dcp1 family decapping family protein.
    
 0.853
ACA1_257430
Pyridoxamine 5'phosphate oxidase family superfamily protein.
  
 0.712
LSM1
U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.
    
 0.629
ACA1_290770
Apolipoprotein AI binding protein.
  
 0.615
ACA1_290780
Proteinbinding protein.
  
 0.615
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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