STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_202770Tetratricopeptide repeat domain containing protein. (155 aa)    
Predicted Functional Partners:
ACA1_369490
CS domain containing protein.
   
 0.693
ACA1_019350
FGGAP repeat domain containing protein.
   
 0.547
ACA1_064290
Uncharacterized protein.
   
 0.520
ACA1_053660
TNF receptor-associated protein 1, putative.
   
 0.520
ACA1_205660
Heat shock protein 82, putative.
   
 0.520
ACA1_205910
Heat shock protein 90 alpha, putative.
   
 0.520
ACA1_166080
Uncharacterized protein.
   
 0.520
ACA1_058840
Heat shock protein gp96, putative.
   
 0.511
ACA1_264770
HSFtype DNA-binding domain containing protein.
    
 0.489
ACA1_150720
Tetratricopeptide repeat domain containing protein.
   
 0.449
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.