STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_020830Amino acid permease, putative. (538 aa)    
Predicted Functional Partners:
ACA1_175450
3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family.
   
 0.631
ACA1_283510
Indole3-glycerol phosphate synthase.
   
 
 0.592
ACA1_389480
Oxidoreductaselike protein.
   
 0.500
ACA1_400390
Alpha amylase, catalytic subfamily protein.
   
 0.500
ACA1_324790
DNA repair family protein.
   
 0.500
ACA1_033490
Glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 0.500
ACA1_244360
Cellulase (Glycosyl hydrolase family 5) subfamily protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 0.500
ACA1_275810
PH domain-containing protein.
   
 0.500
ACA1_331240
Alkylated DNA repair protein.
   
 0.500
ACA1_370220
Cellulase (Glycosyl hydrolase family 5) subfamily protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 0.500
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.