STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_033910Uncharacterized protein. (210 aa)    
Predicted Functional Partners:
ACA1_058010
WD40 repeat protein.
   
 
  0.782
ACA1_384660
Retinoblastoma binding protein 4 variant isoform 1, putative.
    
 0.775
ACA1_323330
Cullin family protein; Belongs to the cullin family.
    
 0.772
ACA1_069430
Cullin 4B, putative; Belongs to the cullin family.
    
 0.772
ACA1_198570
COP9 signalosome complex subunit 4, putative.
    
 0.769
ACA1_098250
WD domain, G-beta repeat-containing protein.
     
 0.755
ACA1_074760
Signalosome complex protein.
    
 0.748
ACA1_279050
COP9 subunit 8, putative.
    
 0.736
ACA1_288000
NEDD8activating enzyme E1 catalytic subunit.
     
 0.717
ACA1_368020
RINGbox protein 1, putative.
    
  0.715
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.