STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_248850Myb, DNA-binding domain containing protein. (183 aa)    
Predicted Functional Partners:
ACA1_064220
Uncharacterized protein.
    
 0.984
ACA1_277810
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.972
ACA1_076980
RuvB-like helicase; Belongs to the RuvB family.
   
 0.968
ACA1_006790
Uncharacterized protein.
    
 0.952
ACA1_180590
TRRAP family protein.
    
 0.925
ACA1_180380
FAT domain containing protein; Belongs to the PI3/PI4-kinase family.
    
 0.925
ACA1_283930
YEATS family protein.
   
 0.921
ACA1_096290
Bucentaur or craniofacial development domain containing protein.
   
 
 0.919
ACA1_139000
Histone H2A; Belongs to the histone H2A family.
    
 
 0.913
ACA1_062310
HIT zinc finger protein.
    
 
 0.910
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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