STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_208330Actin subfamily protein; Belongs to the actin family. (622 aa)    
Predicted Functional Partners:
ACA1_048640
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
  
 0.964
ACA1_330340
PAPA-1 domain-containing protein.
    
 0.909
ACA1_076980
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.894
ACA1_074970
Stressinducible protein STI1-like, putative.
   
 0.878
ACA1_131450
FHA domain containing protein.
    
 0.760
ACA1_358650
Ubiquitin carboxyl-terminal hydrolase.
    
 0.756
ACA1_127610
Core histone h2a/h2b/h3/h4 superfamily protein; Belongs to the histone H2B family.
    
   0.649
ACA1_001870
Histone cluster 1, H2bb, putative; Belongs to the histone H2B family.
    
   0.649
ACA1_265860
Histone H2B; Belongs to the histone H2B family.
    
   0.649
ACA1_023070
Uncharacterized protein.
    
  0.648
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.