STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_393280Uncharacterized protein. (723 aa)    
Predicted Functional Partners:
ACA1_173310
MIF4G domain containing protein.
   
 0.907
ACA1_117330
Hydroxylamine reductase.
    
 0.904
ACA1_173230
Uncharacterized protein.
   
 0.860
ACA1_077140
Nuclear cap-binding protein subunit 2.
   
 0.772
ACA1_192060
Initiation factor eif4 gamma, middle, putative.
    
 0.768
ACA1_149530
Elongation factor Tu GTP binding domain containing protein.
    
 0.743
ACA1_254420
Dcp1 family decapping family protein.
    
 0.742
ACA1_182910
RNA recognition motif domain containing protein.
    
 0.708
ACA1_268930
PWI domain containing protein.
    
 
 0.669
ACA1_356120
Uncharacterized protein.
    
 
 0.637
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.