STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_040510Ubiquitin domain containing protein. (414 aa)    
Predicted Functional Partners:
ACA1_296360
SUMOactivating enzyme subunit 1, putative.
  
 0.964
ACA1_164000
MIZ/SPRING zinc finger domain containing protein.
    
 0.959
ACA1_091430
Znfinger in Ran binding protein and others domain containing protein.
    
 0.957
ACA1_074900
E3 SUMOprotein ligase NSE2, putative.
   
 0.914
ACA1_042030
Sumo domain containing protein.
   
 0.879
ACA1_119840
Ubiquitinlike protein.
   
 0.879
ACA1_291340
Sumo domain-containing protein.
   
 0.879
ACA1_188010
Importin 13, putative.
   
 
 0.876
ACA1_188580
DNA repair and recombination protein RAD52, putative.
    
 0.872
ACA1_318550
HECTdomain (Ubiquitin-transferase) domain containing protein.
    
 0.867
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.