STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_323380ADPribosylglycohydrolase superfamily protein. (315 aa)    
Predicted Functional Partners:
ACA1_066910
Serine/threonine kinase.
    
 0.661
ACA1_176080
Leucine rich repeat domain containing protein.
   
 0.595
ACA1_107580
Calcium/calmodulindependent protein kinase type II delta chain, putative.
    
 0.524
ACA1_247120
K+ channel tetramerisation subfamily protein.
    
 0.496
ACA1_381550
K+ channel tetramerisation subfamily protein.
    
 0.496
ACA1_396150
Dynein heavy chain protein.
    
 0.487
ACA1_063340
Dynein intermediate chain, cytosolic, putative.
   
 0.431
ACA1_186680
RhoGAP domain containing protein.
    
 0.430
ACA1_174010
RhoGAP domain containing protein.
    
 0.430
ACA1_150720
Tetratricopeptide repeat domain containing protein.
    
 0.419
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.