STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_264110Ribosomal protein L3, putative; Belongs to the universal ribosomal protein uL3 family. (398 aa)    
Predicted Functional Partners:
ACA1_191170
Ribosomal protein L21e, putative.
   
 0.999
ACA1_097000
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
  
 
 0.999
ACA1_094930
Ribosomal protein L6, putative.
  
 0.999
ACA1_364390
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
  
 0.999
ACA1_038130
Ribosomal protein L35Ae, putative.
   
 0.999
ACA1_365780
Ribosomal protein S4, putative; Belongs to the universal ribosomal protein uS4 family.
  
 
 0.999
ACA1_271380
Ribosomal protein L10, putative.
  
 0.999
ACA1_220040
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 
 0.999
ACA1_378220
Ribosomal L18p/L5e family.
  
 0.999
ACA1_164710
Ribosomal protein L23, putative; Belongs to the universal ribosomal protein uL23 family.
  
 0.999
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.