STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_265400Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (822 aa)    
Predicted Functional Partners:
ACA1_260070
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 0.999
ACA1_277970
Vacuolar protein sortingassociated protein 26, putative.
   
 0.981
ACA1_247110
ATPase family associated with various cellular activities (AAA) domain containing protein.
   
 0.976
ACA1_171680
PX domain containing protein.
   
 
 0.968
ACA1_017890
Rab-GAP TBC domain-containing protein.
   
 
 0.839
ACA1_033610
Sortilin.
    
 
 0.774
ACA1_204500
Uncharacterized protein.
    
 
 0.652
ACA1_223080
PX domain containing protein.
    
 
 0.589
ACA1_096470
Dual specificity phosphatase, catalytic domain containing protein.
   
 
 0.588
ACA1_096720
FYVE zinc finger domain containing protein.
   
 
 0.558
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.