STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_045060MYND finger domain containing protein. (488 aa)    
Predicted Functional Partners:
ACA1_315820
Uncharacterized protein.
    
 0.991
ACA1_064500
Elongation factor SIII p15 subunit, putative; Belongs to the SKP1 family.
     
 0.840
ACA1_292830
Cullin 1, putative; Belongs to the cullin family.
     
 0.792
ACA1_051820
Ubiquitin family protein.
     
 0.719
ACA1_368020
RINGbox protein 1, putative.
     
 0.685
ACA1_341090
26S protease regulatory subunit 6a, putative; Belongs to the AAA ATPase family.
     
 0.616
ACA1_365720
26S proteasome AAAATPase subunit RPT2a, putative; Belongs to the AAA ATPase family.
   
 
  0.615
ACA1_136150
26S proteasome nonATPase regulatory subunit 7, putative.
    
  0.612
ACA1_369190
Proteasome (Prosome, macropain) 26S subunit, non ATPase, 32, putative.
   
 
  0.611
ACA1_105760
Proteasome/cyclosome repeat containing protein.
     
 0.583
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.