STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_036950R3H domain containing protein. (629 aa)    
Predicted Functional Partners:
ACA1_151230
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.626
ACA1_164710
Ribosomal protein L23, putative; Belongs to the universal ribosomal protein uL23 family.
    
   0.568
ACA1_067910
Ribosomal protein S19, putative; Belongs to the universal ribosomal protein uS19 family.
    
   0.568
ACA1_174430
Ribosomal protein S15, putative; Belongs to the universal ribosomal protein uS15 family.
    
   0.556
ACA1_264110
Ribosomal protein L3, putative; Belongs to the universal ribosomal protein uL3 family.
    
   0.542
ACA1_378220
Ribosomal L18p/L5e family.
    
   0.533
ACA1_361020
Ribosomal L22e protein family.
    
 
 0.531
ACA1_369520
Ribosomal protein L6e, putative.
    
   0.528
ACA1_267880
Ribosomal protein L22, putative; Belongs to the universal ribosomal protein uL22 family.
    
   0.525
ACA1_315760
Ribosomal protein L13, putative.
    
   0.525
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.