STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_198690Sestrinlike protein. (659 aa)    
Predicted Functional Partners:
ACA1_369500
WD domain, Gbeta repeat-containing protein.
    
 0.848
ACA1_283300
Domain found in dishevelled, egl10, and pleckstrin domain containing protein.
    
 0.812
ACA1_255900
Domain found in dishevelled, egl10, and pleckstrin domain containing protein.
    
 0.812
ACA1_172770
Domain found in dishevelled, egl10, and pleckstrin domain containing protein.
    
 0.812
ACA1_158870
Zinc_ribbon_16 domain-containing protein.
    
 0.803
ACA1_274920
PB1 domain containing protein.
    
 0.796
ACA1_293730
PB1 domain containing protein.
    
 0.796
ACA1_175360
PB1 domain containing protein.
    
 0.796
ACA1_370260
TLD family protein.
    
 0.791
ACA1_175530
Nitrogen permase, putative.
    
 0.788
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.