STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_199350EF1 guanine nucleotide exchange domain containing protein. (176 aa)    
Predicted Functional Partners:
ACA1_268910
Elongation factor 1-gamma family protein.
  
 0.999
ACA1_046660
Valine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.981
ACA1_300880
Valine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.981
ACA1_203760
60S ribosomal protein L23, putative; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.893
ACA1_068750
Ribosomal protein L35, putative.
  
 
 0.886
ACA1_220040
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 
 0.875
ACA1_069360
TCTP domain-containing protein; Belongs to the TCTP family.
  
 
 0.873
ACA1_365780
Ribosomal protein S4, putative; Belongs to the universal ribosomal protein uS4 family.
   
 
 0.872
ACA1_030760
TCTP domain-containing protein; Belongs to the TCTP family.
  
 
 0.867
ACA1_271380
Ribosomal protein L10, putative.
  
 
 0.864
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.