STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_269830AMPbinding enzyme domain containing protein. (1117 aa)    
Predicted Functional Partners:
ACA1_290620
Short chain dehydrogenase, putative.
  
 0.541
ACA1_039620
AMPdependent synthetase and ligase.
  
     0.526
ACA1_076160
Peroxisomalcoenzyme A synthetase.
 
 
 0.520
ACA1_092850
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.519
ACA1_237890
SCP2 sterol transfer family protein.
  
 
 0.519
ACA1_275820
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.519
ACA1_063620
Hydroxysteroid dehydrogenase, putative.
  
 
 0.502
ACA1_264850
MaoClike domain containing protein.
  
 
 0.502
ACA1_038530
AMPbinding enzyme, putative.
  
0.479
ACA1_048410
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.475
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.