STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_270660CCAATbinding transcription factor (CBF-B/NF-YA) subunit B domain containing protein. (169 aa)    
Predicted Functional Partners:
ACA1_063640
Core histone h2a/h2b/h3/h4 superfamily protein.
    
 0.957
ACA1_206760
M protein repeat domain containing protein.
    
 
 0.432
ACA1_198350
Helicase associated domain containing protein.
    
 
 0.432
ACA1_322750
Uncharacterized protein.
    
 
 0.432
ACA1_326740
Myosin2 heavy chain, non muscle, putative; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.432
ACA1_367290
Uncharacterized protein.
    
 0.418
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.