STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_277730Shortchain dehydrogenase/reductase (SDR) family protein. (208 aa)    
Predicted Functional Partners:
ACA1_079010
Glycoprotein, synaptic 2 family protein.
   
 
 0.823
ACA1_309340
Protein tyrosine phosphataselike protein, PTPLA.
   
 0.638
ACA1_186210
Tyrosine phosphataselike protein, putative.
   
 0.638
ACA1_186090
Tyrosine phosphatase, putative.
   
 0.638
ACA1_073320
Tyrosine phosphatase, putative.
   
 0.638
ACA1_306860
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.611
ACA1_173270
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
    
  0.566
ACA1_074750
5formyltetrahydrofolate cyclo-ligase subfamily protein.
    
  0.559
ACA1_283510
Indole3-glycerol phosphate synthase.
  
  
 0.546
ACA1_065840
Peroxisomal D3,D2enoyl-CoA isomerase isoform 1 variant, putative.
   
 
 0.533
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.