STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_055510Lsorbosone dehydrogenase. (414 aa)    
Predicted Functional Partners:
ACA1_115170
Uncharacterized protein.
    
 0.704
ACA1_150720
Tetratricopeptide repeat domain containing protein.
    
 0.647
ACA1_285610
Uncharacterized protein.
    
 0.647
ACA1_159980
Anaphase promoting complex subunit 10-like family protein, putative.
    
 0.499
ACA1_360260
SMP30/CGR1 family protein.
  
 
 0.472
ACA1_326110
Alcohol dehydrogenase GroESlike domain containing protein.
  
 
 0.433
ACA1_109790
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
      
 0.429
ACA1_167820
Tryptophan synthase subunit beta, putative.
     
 0.421
ACA1_283560
Tryptophan synthase alpha chain, putative.
     
 0.421
ACA1_091840
Ras subfamily protein.
    
 0.419
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.