STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_283560Tryptophan synthase alpha chain, putative. (686 aa)    
Predicted Functional Partners:
ACA1_167820
Tryptophan synthase subunit beta, putative.
 
0.999
ACA1_283510
Indole3-glycerol phosphate synthase.
 
 0.999
ACA1_283530
Anthranilate phosphoribosyltransferase.
 
 0.996
ACA1_199630
N(5'phosphoribosyl)anthranilate isomerase.
  
 
 0.994
ACA1_167930
Anthranilate synthase component I, putative.
 
 
 0.990
ACA1_283550
Anthranilate synthase component I family protein.
 
 
 0.989
ACA1_158480
Glutamine amidotransferase, putative.
  
 
 0.986
ACA1_256390
Histidinol dehydrogenase; Belongs to the HisA/HisF family.
  
  
 0.985
ACA1_259960
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.979
ACA1_184770
Histidinolphosphate transaminase.
  
  
 0.977
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.