STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_195250Uncharacterized protein. (345 aa)    
Predicted Functional Partners:
ACA1_399210
Tetratricopeptide repeat domain containing protein.
   
 
 0.985
ACA1_383660
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
    0.770
ACA1_368030
Brix domain containing protein.
   
    0.756
ACA1_204570
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
    0.732
ACA1_291650
Ribosomal protein L24e, putative.
   
    0.731
ACA1_109800
WD domain, Gbeta repeat containing protein.
   
  
 0.708
ACA1_065980
Periodic tryptophan protein 2, putative.
   
   0.698
ACA1_267040
Nin one binding (NOB1) Zn-ribbon family protein.
   
  
 0.666
ACA1_216450
Protein MAK16 homolog; Belongs to the MAK16 family.
   
    0.649
ACA1_300720
WD repeat domain 43 isoform 5, putative.
   
   0.641
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.