STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_355850Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (364 aa)    
Predicted Functional Partners:
ACA1_068750
Ribosomal protein L35, putative.
  
 
 0.937
ACA1_378220
Ribosomal L18p/L5e family.
  
 
 0.935
ACA1_094930
Ribosomal protein L6, putative.
  
 
 0.925
ACA1_203760
60S ribosomal protein L23, putative; Belongs to the universal ribosomal protein uL14 family.
  
   0.923
ACA1_164710
Ribosomal protein L23, putative; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.914
ACA1_265570
Ribosomal proteins l2, RNA binding domain containing protein.
  
 
 0.909
ACA1_065720
Ribosomal protein S8, putative; Belongs to the universal ribosomal protein uS8 family.
  
 
 0.895
ACA1_034540
Ribosomal protein S13p/S18e, putative; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.894
ACA1_149890
Ribosomal protein S7p/S5e, putative; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.888
ACA1_067910
Ribosomal protein S19, putative; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.870
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.