STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_116780MIF4G domain containing protein. (907 aa)    
Predicted Functional Partners:
ACA1_069320
Eukaryotic initiation factor, putative; Belongs to the eukaryotic initiation factor 4E family.
   
 0.895
ACA1_192060
Initiation factor eif4 gamma, middle, putative.
   
 0.829
ACA1_077140
Nuclear cap-binding protein subunit 2.
    
 0.760
ACA1_234620
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.728
ACA1_262410
RNA recognition motif domain containing protein.
   
 0.728
ACA1_230190
RNA recognition motif domain containing protein.
   
 0.728
ACA1_393000
Domain found in if2b/if5 domain containing protein.
   
 0.719
ACA1_266080
DEAD/DEAH box helicase/helicase conserved Cterminal domain containing protein; Belongs to the DEAD box helicase family.
   
 0.684
ACA1_233090
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 
 0.676
ACA1_074960
Eukaryotic translation initiation factor 3 subunit 1like protein.
   
 0.623
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.