STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_186750Delta5 fatty acid desaturase. (171 aa)    
Predicted Functional Partners:
ACA1_219750
Geranylgeranyl reductase subfamily protein.
   
 
 0.562
ACA1_035520
SterolC5-desaturase; Belongs to the sterol desaturase family.
  
 
 0.553
ACA1_377740
Adrenodoxinlike ferredoxin 2.
  
 
 0.552
ACA1_400540
Sphingosine hydroxylase; Belongs to the sterol desaturase family.
  
 
 0.522
ACA1_129350
4alpha-methyl-sterol C4-methyl-oxidase; Belongs to the sterol desaturase family.
  
 
 0.500
ACA1_130310
Sterol desaturase; Belongs to the sterol desaturase family.
  
 
 0.500
ACA1_130460
C5orf4 protein; Belongs to the sterol desaturase family.
  
 
 0.500
ACA1_058020
C4methyl sterol oxidase; Belongs to the sterol desaturase family.
  
 
 0.500
ACA1_360510
4alpha-methyl-sterol C4-methyl-oxidase; Belongs to the sterol desaturase family.
  
 
 0.500
ACA1_323150
Cytochrome b5 domain containing protein.
  
 
 0.499
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.