STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_046740Transmembrane amino acid transporter, putative. (513 aa)    
Predicted Functional Partners:
ACA1_039330
Roadblock/LC7 domain containing protein.
    
 0.650
ACA1_033670
Rasrelated GTP-binding protein, putative.
    
 0.585
ACA1_054330
Hbxip, putative.
    
 0.579
ACA1_229730
Ras-related GTP-binding protein A, putative.
   
 0.560
ACA1_290160
Rasrelated GTP binding B long isoform isoform 1, putative.
   
 0.560
ACA1_232690
Vacuolar proton pump d subunit, putative.
    
 0.521
ACA1_283510
Indole3-glycerol phosphate synthase.
   
  
 0.517
ACA1_022710
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
    
 0.485
ACA1_298640
V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
     
 0.469
ACA1_377770
WDrepeat protein pop3, putative.
    
 0.463
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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