STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_251810Zinc finger (C3HC4type RING finger) family protein. (95 aa)    
Predicted Functional Partners:
ACA1_064860
Ubiquitin thioesterase otubainlike, putative.
    
 0.824
ACA1_173990
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
  
  
 0.540
ACA1_336110
Zinc finger, C3HC4 type (RING finger) domain containing protein.
  
 
 0.447
ACA1_171090
Cytochrome-c oxidase.
      
 0.436
ACA1_040830
Ubiquitinconjugating enzyme protein E2, putative; Belongs to the ubiquitin-conjugating enzyme family.
  
 
 0.405
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.