STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_315820Uncharacterized protein. (594 aa)    
Predicted Functional Partners:
ACA1_045060
MYND finger domain containing protein.
    
 0.991
ACA1_064500
Elongation factor SIII p15 subunit, putative; Belongs to the SKP1 family.
    
 0.937
ACA1_051820
Ubiquitin family protein.
    
 0.915
ACA1_367290
Uncharacterized protein.
    
 0.901
ACA1_292830
Cullin 1, putative; Belongs to the cullin family.
    
 0.880
ACA1_066910
Serine/threonine kinase.
    
 0.713
ACA1_368020
RINGbox protein 1, putative.
    
 0.705
ACA1_128490
Proteasome 26S subunit, nonATPase, 1, putative; Belongs to the proteasome subunit S1 family.
    
 0.688
ACA1_187350
Uncharacterized protein.
    
 0.678
ACA1_170940
Proteasome subunit alpha type.
   
  0.674
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.