STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_254400Golgi family protein, putative. (670 aa)    
Predicted Functional Partners:
ACA1_396730
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.977
ACA1_048060
Vps51/Vps67 protein.
   
 0.974
ACA1_397180
Uncharacterized protein.
   
 0.967
ACA1_198820
Sec34 family protein.
    
 0.966
ACA1_265300
COG4 transport protein.
   
 0.945
ACA1_275280
Uncharacterized protein.
    
 0.934
ACA1_381600
Golgi family protein, putative.
    
 0.934
ACA1_115370
Uncharacterized protein.
   
 0.921
ACA1_252880
Uncharacterized protein.
    
 0.920
ACA1_207340
Syntaxinlike t-SNARE protein TLG2, putative.
    
 0.826
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.