STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_361230Tubulintyrosine ligase family protein. (622 aa)    
Predicted Functional Partners:
ACA1_254420
Dcp1 family decapping family protein.
    
 
 0.841
ACA1_053270
Hydrolase, NUDIX domain containing protein.
    
 
 0.671
ACA1_158500
Hydrolase nudix family protein.
    
 
 0.671
ACA1_257430
Pyridoxamine 5'phosphate oxidase family superfamily protein.
    
 
 0.604
ACA1_290770
Apolipoprotein AI binding protein.
    
 
 0.604
ACA1_290780
Proteinbinding protein.
    
 
 0.604
ACA1_092650
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.407
ACA1_204480
Tubulin/FtsZ family, GTPase domain containing protein; Belongs to the tubulin family.
   
 0.407
ACA1_184340
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
   
 0.407
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.