STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_255140Hypoxia induced protein region protein, putative. (125 aa)    
Predicted Functional Partners:
ACA1_095250
Cytochrome c oxidase.
   
 
 0.965
ACA1_171090
Cytochrome-c oxidase.
   
 
 0.909
ACA1_296910
Peptidase M16 inactive domain containing protein; Belongs to the peptidase M16 family.
   
 
 0.885
ACA1_318550
HECTdomain (Ubiquitin-transferase) domain containing protein.
   
 
 0.777
ACA1_182530
Pumiliofamily RNA binding repeat domain containing protein.
    
   0.669
ACA1_087670
Peptidase M16 family protein.
   
 
 0.604
ACA1_287730
Peptidase M16 inactive domain containing protein.
   
 
 0.604
ACA1_385800
TPR repeat region protein.
   
  
 0.560
ACA1_175250
Cytochrome c, putative; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
  
 0.508
ACA1_223280
Cytochrome c1, putative.
   
 
 0.494
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.