STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_072510Uncharacterized protein. (132 aa)    
Predicted Functional Partners:
ACA1_149270
MIF4G domain containing protein.
    
  0.932
ACA1_040820
Ubiquitin-like domain-containing protein.
   
 0.875
ACA1_220130
Uncharacterized protein.
    
 0.872
ACA1_157280
SYF2 splicing factor, putative.
   
 0.853
ACA1_064830
Nkap_C domain-containing protein.
    
 0.819
ACA1_313600
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.795
ACA1_364500
EH-binding protein, putative.
    
  0.699
ACA1_195180
Coiled-coil domain containing protein 94, putative.
   
 
 0.682
ACA1_054320
PremRNA processing splicing factor 8, putative.
    
   0.678
ACA1_349660
BAT1 protein.
    
  0.649
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.