STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_069650Glycine-tRNA ligase. (640 aa)    
Predicted Functional Partners:
ACA1_069770
Tyrosine--tRNA ligase.
  
 
 0.916
ACA1_176860
Glnglu non-discriminatory tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.892
ACA1_132360
Glutamine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.892
ACA1_282850
Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.823
ACA1_097970
Methionine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.766
ACA1_093830
Isoleucine-tRNA ligase.
  
 
 0.763
ACA1_396190
Glutamine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.751
ACA1_072800
Methionine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.710
ACA1_046660
Valine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.706
ACA1_300880
Valine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.706
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.