STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_073460ABC exporter, ATPbinding protein. (677 aa)    
Predicted Functional Partners:
ACA1_282400
ABC transporter, ATPbinding domain containing protein.
  
  
 
0.903
ACA1_028650
Peroxisomal biogenesis protein Pex19, putative.
    
 0.813
ACA1_151280
Peroxin-3 protein.
   
 0.731
ACA1_093740
Serine/threonine protein kinase.
    
 0.710
ACA1_260000
Peroxisomal membrane protein PEX16.
     
 0.693
ACA1_053820
Peroxisomal membrane anchor protein (Pex14p) region protein, putative.
   
 0.691
ACA1_053870
SH3 domain containing protein.
   
 
 0.686
ACA1_191530
Peroxisome assembly protein, putative.
   
 
 0.681
ACA1_198520
Carrier superfamily protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.663
ACA1_220740
Mitochondrial fission 1 protein.
     
 0.632
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.