STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_068920WD domain, G-beta repeat-containing protein. (381 aa)    
Predicted Functional Partners:
ACA1_068720
WD repeatcontaining protein.
  
 
  0.574
ACA1_394270
Fbox domain containing protein.
  
  0.557
ACA1_089770
Fbox domain containing protein.
  
  0.553
ACA1_142310
WD domain, Gbeta repeat-containing protein.
  
  0.552
ACA1_089440
NBARC domain containing protein.
  
 
  0.545
ACA1_165510
WD40 repeat-containing protein.
  
 
   0.540
ACA1_251800
WD domain, Gbeta repeat-containing protein.
  
     0.535
ACA1_238280
WD40 repeat-containing protein.
  
     0.534
ACA1_201540
WD repeatcontaining protein.
  
     0.533
ACA1_002320
Fbox domain containing protein.
  
     0.532
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.