STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_072550Estrogen receptor binding protein. (247 aa)    
Predicted Functional Partners:
ACA1_092800
TRAUB domain containing protein.
   
 
 0.992
ACA1_295370
Ribosome biogenesis protein.
   
 
 0.992
ACA1_364720
Sas10/Utp3/C1D family protein.
   
 
 0.990
ACA1_237290
Utp21 domain-containing protein.
   
 
 0.990
ACA1_227010
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 
 0.990
ACA1_149220
Sas10 Cterminal domain containing protein.
   
 
 0.990
ACA1_183040
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
 
 0.987
ACA1_367340
U3 small nucleolar rnaassociated protein 7, putative.
   
 
 0.986
ACA1_251460
U3 small nucleolar ribonucleoprotein component, putative.
   
   0.986
ACA1_365100
U3 small nucleolar RNA-associated protein 6 protein.
   
 
 0.984
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.