STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_013490Amidohydrolase. (340 aa)    
Predicted Functional Partners:
ACA1_269680
Orotidine 5'phosphate decarboxylase.
  
  
 0.795
ACA1_192070
Uncharacterized protein.
  
 0.744
ACA1_061890
Dihydroorotate oxidase.
  
 0.739
ACA1_267180
Carbamoylphosphate synthase, large subunit.
  
 0.689
ACA1_183730
Slime mold cyclic amp receptor protein.
  
 0.689
ACA1_182350
Carbamoylphosphate synthase, large subunit.
  
 0.689
ACA1_289920
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 0.689
ACA1_054310
Nitrate reductase, putative.
  
 
 0.683
ACA1_091290
Golgi transport 1 A family protein.
  
 
 0.661
ACA1_326140
Ferric reductaselike protein.
  
 
 0.661
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.