STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_376220Breast carcinoma amplified sequence 2 (Bcas2) protein. (250 aa)    
Predicted Functional Partners:
ACA1_314230
Myblike DNA binding protein, putative.
   
 0.998
ACA1_400170
WD domain, Gbeta repeat-containing protein.
   
 0.998
ACA1_289060
Uncharacterized protein.
   
 0.998
ACA1_174450
Cwf15/Cwc15 cell cycle control protein.
   
 0.993
ACA1_054320
PremRNA processing splicing factor 8, putative.
    
 
 0.988
ACA1_090090
Elongation factor Tu GTP binding domain containing protein.
   
 
 0.984
ACA1_236140
Spliceosomal protein, putative.
   
   0.974
ACA1_060220
U5 small nuclear ribonucleoprotein helicase, putative.
    
 
 0.962
ACA1_164930
SKIP/SNW subfamily protein.
   
 
 0.954
ACA1_248370
DUF1716 domain-containing protein.
   
 0.952
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.