STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_030760TCTP domain-containing protein; Belongs to the TCTP family. (191 aa)    
Predicted Functional Partners:
ACA1_268910
Elongation factor 1-gamma family protein.
   
 
 0.981
ACA1_224300
EF1 guanine nucleotide exchange domain containing protein.
  
 
 0.869
ACA1_199350
EF1 guanine nucleotide exchange domain containing protein.
  
 
 0.867
ACA1_271380
Ribosomal protein L10, putative.
   
 
 0.853
ACA1_288920
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 
 0.843
ACA1_094930
Ribosomal protein L6, putative.
   
 
 0.838
ACA1_119160
Ribosomal protein L31e, putative.
   
 
 0.836
ACA1_268880
Ribosomal protein S9, putative; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.834
ACA1_067910
Ribosomal protein S19, putative; Belongs to the universal ribosomal protein uS19 family.
   
   0.832
ACA1_309510
40S ribosomal protein S27.
   
 
 0.831
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.