STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_289990Uncharacterized protein. (329 aa)    
Predicted Functional Partners:
ACA1_258250
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.906
ACA1_258240
KH domain containing protein.
   
 
 0.906
ACA1_182340
NUC153 domain-containing protein.
   
  
 0.798
ACA1_009160
Uncharacterized protein.
   
   0.795
ACA1_248230
Ribonuclease P/MRP 30 subunit.
   
   0.792
ACA1_276860
Ribonuclease, putative.
   
   0.784
ACA1_291690
Nop14 family protein.
   
 
 0.783
ACA1_201630
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.
   
 
 0.772
ACA1_115430
DEAD/DEAH box helicase domain containing protein; Belongs to the DEAD box helicase family.
   
 
 0.763
ACA1_138320
Brix domain containing protein.
   
    0.757
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.