STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_119210CUE domain containing protein. (777 aa)    
Predicted Functional Partners:
ACA1_071250
DEAD box RNA helicase, putative.
    
 0.949
ACA1_074550
Activating signal cointegrator protein.
    
 
 0.882
ACA1_346010
Activating signal cointegrator 1, putative.
    
 
 0.882
ACA1_060220
U5 small nuclear ribonucleoprotein helicase, putative.
    
 0.881
ACA1_112470
KH domain containing protein.
    
 0.857
ACA1_245670
Uncharacterized protein.
      
 0.426
ACA1_095560
Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.
      
 0.422
ACA1_063520
Zinc finger, c2h2 type domain containing protein.
    
 
 0.417
ACA1_226190
Zinc finger, c2h2 type domain containing protein.
    
 
 0.417
ACA1_035590
Ankyrin repeat and zinc finger domain protein, putative.
   
  
 0.415
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.