STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_292860ABC transporter related, putative. (593 aa)    
Predicted Functional Partners:
ACA1_046430
Ribosomal protein L20, putative; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.770
ACA1_149890
Ribosomal protein S7p/S5e, putative; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.768
ACA1_095890
Ribosomal protein L27, putative.
  
 
 0.760
ACA1_174430
Ribosomal protein S15, putative; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.757
ACA1_399950
Ribosomal protein L21, putative.
  
   0.755
ACA1_232480
Ribosomal protein S23 (S12), putative; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.754
ACA1_068750
Ribosomal protein L35, putative.
   
 
 0.749
ACA1_164710
Ribosomal protein L23, putative; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.743
ACA1_094930
Ribosomal protein L6, putative.
  
 
 0.741
ACA1_061660
Ribosomal L5P family Cterminus, putative; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.740
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.