STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_288870Peroxisomal 2,4dienoyl-coa reductase. (303 aa)    
Predicted Functional Partners:
ACA1_377740
Adrenodoxinlike ferredoxin 2.
   
 0.534
ACA1_220700
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.507
ACA1_306860
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.480
ACA1_065840
Peroxisomal D3,D2enoyl-CoA isomerase isoform 1 variant, putative.
  
 0.474
ACA1_057010
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
   
 
 0.450
ACA1_199730
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
   
 
 0.450
ACA1_128570
3hydroxyacyl-CoA dehydrogenase, NAD binding domain containing protein.
  
 0.438
ACA1_054310
Nitrate reductase, putative.
  
 0.417
ACA1_127440
[Acyl-carrier protein] S-malonyltransferase.
  
 
 0.412
ACA1_144880
Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
  
 0.411
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.