STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_288930Uncharacterized protein. (2103 aa)    
Predicted Functional Partners:
ACA1_091380
S1 RNA binding domain containing protein.
   
 
 0.930
ACA1_287860
BP28CT domain-containing protein.
   
 
 0.857
ACA1_198460
Uncharacterized protein.
   
  
 0.847
ACA1_062690
DEAD/DEAH box helicase domain containing protein.
   
 
 0.839
ACA1_065980
Periodic tryptophan protein 2, putative.
   
  
 0.821
ACA1_125550
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  
 0.820
ACA1_237290
Utp21 domain-containing protein.
   
  
 0.797
ACA1_296930
Cirhin isoform 3, putative.
   
    0.791
ACA1_109080
Nucleolar RNAassociated protein alpha isoform, putative.
   
    0.764
ACA1_204120
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.753
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.