STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378005_01196Unannotated protein. (546 aa)    
Predicted Functional Partners:
GCA_000378005_00057
Unannotated protein.
    
 0.870
GCA_000378005_00058
Unannotated protein.
    
 0.831
GCA_000378005_00033
Unannotated protein.
 
  
 0.738
GCA_000378005_01342
Unannotated protein.
    
 0.728
GCA_000378005_01256
Unannotated protein.
    
 0.727
GCA_000378005_01366
Unannotated protein.
    
 0.701
GCA_000378005_01046
Unannotated protein.
    
 0.665
GCA_000378005_01019
Unannotated protein.
     
 0.658
GCA_000378005_01079
Unannotated protein.
     
 0.657
GCA_000378005_00027
Unannotated protein.
     
 0.654
Your Current Organism:
Coprothermobacter platensis
NCBI taxonomy Id: 1259795
Other names: C. platensis DSM 11748, Coprothermobacter platensis DSM 11748
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.