STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGM40443.1Amine oxidase; COG2907 Predicted NAD/FAD-binding protein. (440 aa)    
Predicted Functional Partners:
AGM40441.1
COG2230 Cyclopropane fatty acid synthase and related methyltransferases.
  
 0.996
AGM40442.1
Hypothetical protein.
 
  
 0.967
AGM41650.1
COG2230 Cyclopropane fatty acid synthase and related methyltransferases.
  
 0.958
AGM40440.1
Major facilitator superfamily transport protein; COG2211 Na+/melibiose symporter and related transporters.
 
   
 0.823
AGM41344.1
Lipoprotein.
 
   
 0.718
AGM40438.1
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.633
AGM40439.1
Hypothetical protein.
 
   
 0.598
moaB
Molybdenum cofactor biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.
       0.531
AGM40445.1
COG1309 Transcriptional regulator.
       0.531
AGM40446.1
COG0036 Pentose-5-phosphate-3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
       0.531
Your Current Organism:
Spiribacter salinus
NCBI taxonomy Id: 1260251
Other names: Ectothiorhodospiraceae bacterium M19-40, S. salinus M19-40, Spiribacter salinus M19-40
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