STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGM40542.1Hypothetical protein. (109 aa)    
Predicted Functional Partners:
AGM40543.1
ABC transporter-like protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.
     
 0.784
AGM40541.1
Hypothetical protein; COG2607 Predicted ATPase (AAA+ superfamily).
 
    0.621
AGM40544.1
Extracellular ligand-binding receptor; COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
  
  
 0.547
gltB
COG0067 Glutamate synthase domain 1.
  
  
 0.516
argA
N-acetylglutamate synthase; COG0548 Acetylglutamate kinase; Belongs to the acetyltransferase family. ArgA subfamily.
  
  
 0.434
AGM40563.1
ABC transporter-like protein; COG1117 ABC-type phosphate transport system, ATPase component.
  
 
 0.424
AGM41340.1
COG4103 Uncharacterized protein conserved in bacteria.
  
    0.415
pheA
COG1605 Chorismate mutase.
      
 0.410
Your Current Organism:
Spiribacter salinus
NCBI taxonomy Id: 1260251
Other names: Ectothiorhodospiraceae bacterium M19-40, S. salinus M19-40, Spiribacter salinus M19-40
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.