STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGM41661.1COG0277 FAD/FMN-containing dehydrogenases. (476 aa)    
Predicted Functional Partners:
AGM40918.1
COG2025 Electron transfer flavoprotein, alpha subunit.
 
 
 0.584
AGM40919.1
COG2086 Electron transfer flavoprotein, beta subunit.
 
 
 0.545
AGM41659.1
COG0726 Predicted xylanase/chitin deacetylase.
       0.544
AGM41660.1
YfaZ family protein.
       0.544
AGM41658.1
Cyclic AMP phosphodiesterase; COG1409 Predicted phosphohydrolases.
       0.537
AGM40138.1
COG0281 Malic enzyme.
 
  
 0.536
gltB
COG0067 Glutamate synthase domain 1.
     
 0.531
AGM41557.1
Long-chain-fatty-acid--CoA ligase; COG1022 Long-chain acyl-CoA synthetases (AMP-forming).
   
 
 0.517
glcF
Glycolate oxidase iron-sulfur subunit; COG0247 Fe-S oxidoreductase.
  
 0.511
AGM41654.1
PA-phosphatase-like phosphoesterase; COG0586 Uncharacterized membrane-associated protein.
     
 0.493
Your Current Organism:
Spiribacter salinus
NCBI taxonomy Id: 1260251
Other names: Ectothiorhodospiraceae bacterium M19-40, S. salinus M19-40, Spiribacter salinus M19-40
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.