Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00073M protein trans-acting positive regulator; KEGG: bhr:BH0634 0.0011 exodeoxyribonuclease V gamma chain K03583; Psort location: Cytoplasmic, score: 7.50. (474 aa)    
Predicted Functional Partners:
D920_00062
Hypothetical protein; KEGG: dda:Dd703_0763 1.9e-10 PTS system beta-glucoside-specific transporter subunit IIABC; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757; Psort location: CytoplasmicMembrane, score: 9.55.
  
 
 0.963
D920_00484
KEGG: efu:HMPREF0351_10658 2.2e-291 PTS family sucrose porter component IIABC; K02809 PTS system, sucrose-specific IIB component K02810; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.963
D920_00712
KEGG: efu:HMPREF0351_11993 9.2e-261 bglP2; PTS family glucose/glucoside (glc) porter component IIABC; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.963
D920_01608
KEGG: lpl:lp_0185 1.3e-174 pts1BCA; PTS system, oligosucrose-specific EIIBCA component; K02808 PTS system, sucrose-specific IIA component; K02809 PTS system, sucrose-specific IIB component K02810; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.963
D920_02256
KEGG: efi:OG1RF_11231 1.0e-270 ptsG; PTS family glucose porter, IICBA component; K02802 PTS system, N-acetylglucosamine-specific IIA component; K02803 PTS system, N-acetylglucosamine-specific IIB component K02804; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.963
D920_02273
KEGG: efc:EFAU004_00409 0. PTS system glucose-specific transporter subunit IIABC; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.963
D920_00947
PTS system mannose-specific EIIBCA component; KEGG: efu:HMPREF0351_11043 1.3e-222 manP; PTS system fructose/mannitol (fru) transporter subunit IIABC; K02793 PTS system, mannose-specific IIA component; K02794 PTS system, mannose-specific IIB component K02795; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.954
D920_01985
PTS system fructose-specific EIIABC component; KEGG: efu:HMPREF0351_11611 4.1e-297 fruAB; PTS system fructose/mannitol (fru) transporter subunit IIABC; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.954
D920_00071
Hypothetical protein.
     
 0.913
D920_00063
Hypothetical protein; KEGG: lci:LCK_00128 1.7e-12 phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757; Psort location: CytoplasmicMembrane, score: 9.55.
  
 
 0.887
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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