Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00105Hypothetical protein; KEGG: bha:BH2080 1.1e-21 wprA; cell wall-associated protease; K13274 cell wall-associated protease; Psort location: Cellwall, score: 9.94. (439 aa)    
Predicted Functional Partners:
D920_00601
KEGG: efc:EFAU004_02112 8.3e-102 N-acetylmuramoyl-L-alanine amidase K01448; Psort location: Cellwall, score: 8.75.
  
  
 0.946
D920_01294
N-acetylmuramoyl-L-alanine amidase; KEGG: llt:CVCAS_0201 8.7e-67 yccB; glycoside hydrolase family protein.
  
  
 0.937
D920_01583
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; KEGG: llt:CVCAS_0201 3.3e-50 yccB; glycoside hydrolase family protein; Psort location: Extracellular, score: 9.73.
  
  
 0.937
D920_01312
Glycosyltransferase, group 2 family protein; KEGG: efu:HMPREF0351_10905 0. family 2 glycosyl transferase; Psort location: CytoplasmicMembrane, score: 8.78.
     
 0.865
D920_01313
Methyltransferase domain protein; KEGG: efu:HMPREF0351_10904 4.1e-203 methyltransferase; Psort location: Cytoplasmic, score: 7.50.
     
 0.860
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
     
 0.839
D920_02765
Hypothetical protein; KEGG: ssr:SALIVB_0977 8.2e-15 signal transduction histidine kinase, LytS; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.833
purM
KEGG: efc:EFAU004_01107 3.1e-134 Phosphoribosylformylglycinamidine cyclo-ligase K01933; Psort location: Cytoplasmic, score: 9.97.
  
    0.831
D920_03024
3D domain protein; KEGG: bce:BC5196 4.4e-17 N-acetylmuramoyl-L-alanine amidase; Psort location: Extracellular, score: 9.60.
  
  
 0.829
D920_02606
LysM domain protein; KEGG: scp:HMPREF0833_11456 7.4e-09 isaA; immunodominant antigen A; Psort location: Extracellular, score: 9.13.
  
  
 0.827
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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