Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00115KEGG: bmq:BMQ_1120 8.1e-40 glycosyl transferase group 1 protein; Psort location: Cytoplasmic, score: 7.50. (335 aa)    
Predicted Functional Partners:
D920_00113
KEGG: cmr:Cycma_0769 1.2e-59 WecB/TagA/CpsF family glycosyl transferase; K05946 N-acetylglucosaminyldiphosphoundecaprenol; Psort location: Cytoplasmic, score: 7.50; Belongs to the glycosyltransferase 26 family.
 
 
 0.985
D920_01881
KEGG: suq:HMPREF0772_10540 8.5e-45 gtfB; accessory Sec system glycosyltransferase GtfB.
   
 
 0.983
D920_00114
Hypothetical protein; KEGG: pml:ATP_00236 0.0048 cdsA; probable phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.980
D920_00112
Bacterial sugar transferase; KEGG: pjd:Pjdr2_1221 4.6e-53 undecaprenyl-phosphate galactose phosphotransferase; Psort location: CytoplasmicMembrane, score: 9.51.
 
  
 0.973
D920_00582
NAD dependent epimerase/dehydratase family protein; KEGG: sud:ST398NM01_0168 4.4e-119 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.964
D920_01885
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.960
D920_00110
KEGG: mad:HP15_1904 1.3e-14 polysaccharide pyruvyl transferase.
  
  
 0.956
D920_00111
Polysaccharide biosynthesis protein; KEGG: cco:CCC13826_0528 1.8e-24 cytosol aminopeptidase; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.956
D920_01313
Methyltransferase domain protein; KEGG: efu:HMPREF0351_10904 4.1e-203 methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.944
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
  
 0.942
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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